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Organic Chemistry I: 5.5 Fisher Projection

Organic Chemistry I
5.5 Fisher Projection
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table of contents
  1. Cover
  2. Title Page
  3. Copyright
  4. Table Of Contents
  5. Introduction
  6. Acknowledgements
  7. Chapter 1 Basic Concepts in Chemical Bonding and Organic Molecules
    1. 1.1 Chemical Bonding
    2. 1.2 Lewis Structure
    3. 1.3 Resonance Structures
    4. 1.4 Resonance structures in Organic Chemistry
    5. 1.5 Valence-Shell Electron-Pair Repulsion Theory (VSEPR)
    6. 1.6 Valence Bond Theory and Hybridization
    7. Answers to Practice Questions Chapter 1
  8. Chapter 2 Fundamental of Organic Structures
    1. 2.1 Structures of Alkenes
    2. 2.2 Nomenclature of Alkanes
    3. 2.3 Functional Groups
    4. 2.4 IUPAC Naming of Organic Compounds with Functional Groups
    5. 2.5 Degree of Unsaturation/Index of Hydrogen Deficiency
    6. 2.6 Intermolecular Force and Physical Properties of Organic Compounds
    7. Answers to Practice Questions Chapter 2
  9. Chapter 3 Acids and Bases: Organic Reaction Mechanism Introduction
    1. 3.1 Review of Acids and Bases and Ka
    2. 3.2 Organic Acids and Bases and Organic Reaction Mechanism
    3. 3.3 pKa of Organic Acids and Application of pKa to Predict Acid-Base Reaction Outcome
    4. 3.4 Structural Effects on Acidity and Basicity
    5. 3.5 Lewis Acids and Lewis Bases
    6. Answers to Practice Questions Chapter 3
  10. Chapter 4 Conformations of Alkanes and Cycloalkanes
    1. 4.1 Conformation Analysis of Alkanes
    2. 4.2 Cycloalkanes and Their Relative Stabilities
    3. 4.3 Conformation Analysis of Cyclohexane
    4. 4.4 Substituted Cyclohexanes
    5. Answers to Practice Questions Chapter 4
  11. Chapter 5 Stereochemistry
    1. 5.1 Summary of Isomers
    2. 5.2 Geometric Isomers and E/Z Naming System
    3. 5.3 Chirality and R/S Naming System
    4. 5.4 Optical Activity
    5. 5.5 Fisher Projection
    6. 5.6 Compounds with More Than One Chirality Centers
    7. Answers to Practice Questions Chapter 5
  12. Chapter 6 Structural Identification of Organic Compounds: IR and NMR Spectroscopy
    1. 6.1 Electromagnetic Radiation and Molecular Spectroscopy
    2. 6.2 Infrared (IR) Spectroscopy Theory
    3. 6.3 IR Spectrum and Characteristic Absorption Bands
    4. 6.4 IR Spectrum Interpretation Practice
    5. 6.5 NMR Theory and Experiment
    6. 6.6 ¹H NMR Spectra and Interpretation (Part I)
    7. 6.7 ¹H NMR Spectra and Interpretation (Part II)
    8. 6.8 ¹³C NMR Spectroscopy
    9. 6.9 Structure Determination Practice
    10. Answers to Practice Questions Chapter 6
  13. Chapter 7 Nucleophilic Substitution Reactions
    1. 7.1 Nucleophilic Substitution Reaction Overview
    2. 7.2 SN2 Reaction Mechanism, Energy Diagram and Stereochemistry
    3. 7.3 Other Factors that Affect SN2 Reactions
    4. 7.4 SN1 Reaction Mechanism, Energy Diagram and Stereochemistry
    5. 7.5 SN1 vs SN2
    6. 7.6 Extra Topics on Nucleophilic Substitution Reaction
    7. Answers to Practice Questions Chapter 7
  14. Chapter 8 Elimination Reactions
    1. 8.1 E2 Reaction
    2. 8.2 E1 Reaction
    3. 8.3 E1/E2 Summary
    4. 8.4 Comparison and Competition Between SN1, SN2, E1 and E2
    5. Answers to Practice Questions Chapter 8
  15. Chapter 9 Free Radical Substitution Reaction of Alkanes
    1. 9.1 Homolytic and Heterolytic Cleavage
    2. 9.2 Halogenation Reaction of Alkanes
    3. 9.3 Stability of Alkyl Radicals
    4. 9.4 Chlorination vs Bromination
    5. 9.5 Stereochemistry for Halogenation of Alkanes
    6. 9.6 Synthesis of Target Molecules: Introduction of Retrosynthetic Analysis
    7. Answers to Practice Questions Chapter 9
  16. Chapter 10 Alkenes and Alkynes
    1. 10.1 Synthesis of Alkenes
    2. 10.2 Reactions of Alkenes: Addition of Hydrogen Halide to Alkenes
    3. 10.3 Reactions of Alkenes: Addition of Water (or Alcohol) to Alkenes
    4. 10.4 Reactions of Alkenes: Addition of Bromine and Chlorine to Alkenes
    5. 10.5 Reaction of Alkenes: Hydrogenation
    6. 10.6 Two Other Hydration Reactions of Alkenes
    7. 10.7 Oxidation Reactions of Alkenes
    8. 10.8 Alkynes
    9. Answers to Practice Questions Chapter 10
  17. About the Author

5.5 Fisher Projection

For the discussions so far, the perspective formula with solid and dashed wedges have been used to represent the 3D arrangement of groups bonded to a chirality center. Other than that, there is another broadly applied formula for that purpose, that is the Fisher projection. A Fisher projection is a shortcut for showing the spatial group arrangement of a chirality center, it is more easily to be drawn and recognized, and is particularly useful for showing the structures with more than one chirality centers.

In Fisher projection, the chirality center is shown as the intersection of two perpendicular lines. The horizontal lines represent the bonds point out of the plane, and the vertical lines represent the bonds that point behind the plane. 

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It is very important to keep in mind that the lines in Fisher projection are not just bonds, they represent the bonds with specific spatial arrangements and stereochemistry.

Assigning R/S Configuration in Fisher projection

Taking the following compound as an example:

H (top), Cl (right), CH2CH3 (bottom), CH3 (left)

  1. Assign group priority as we usually do.

Cl (1), CH2CH3 (2), CH3 (3), H (4)

  1. If the lowest priority group (#4 group) is on a vertical bond, determine the priority decrease direction from #1→#2→#3 as usual to get the configuration, clockwise is R and counterclockwise is S.

R-configuration

So, the example here is a R-isomer, and the complete name of the compound is (R)-2-chlorobutane.

  1. If the lowest priority group is on a horizontal bond (as the case in the following structure), determine the priority decrease direction as in step 2, then reverse the answer to opposite way, to get the final configuration.

clockwise; however since the #4 group is horizontal bond, the answer need to be reversed, = S

So, the example here is a S-isomer, and the complete name of the compound is (S)-2-chlorobutane.

Exercises 5.6

Explain that why in step 3 of the above procedure, the answer should be reversed to get the final (actual) configuration?

Answers to Practice Questions Chapter 5

Exercises 5.7: Indicate the configuration of the following structures.

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Properties of Fisher projection:

1. One switch (interchange) of two groups in a Fisher projection invert the configuration, two switches bring the original isomer back.

A=CH3 (top), Br (R), CH2CH3 (bottom), Cl (L), switch CH3 and Br (B)=R-configuration, switch CH2CH3, Cl (C)=S-configuration

For above structures:

  • one switch of A leads to B, A and B are enantiomers;
  • one switch of B leads to C, B and C are enantiomers;
  • two switches of C leads to A, A and C are identical.

2. Rotate the Fisher projection 180º get same structure, with the configuration retained.

Both are S-configurations

  • 180º rotation of A leads to B, A and B are identical.

3. Rotate the Fisher projection 90º get the configuration inverted.

S-configuration becomes R-configuration

  • 90º rotation of A leads to B, A and B are enantiomers.

Do NOT rotate the Fisher projection 90º, unless you have to. Keep in mind that the configuration get inverted by 90º rotation.

Annotate

Next Chapter
5.6 Compounds with More Than One Chirality Centers
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