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Organic Chemistry I: 6.8 ¹³C NMR Spectroscopy

Organic Chemistry I
6.8 ¹³C NMR Spectroscopy
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table of contents
  1. Cover
  2. Title Page
  3. Copyright
  4. Table Of Contents
  5. Introduction
  6. Acknowledgements
  7. Chapter 1 Basic Concepts in Chemical Bonding and Organic Molecules
    1. 1.1 Chemical Bonding
    2. 1.2 Lewis Structure
    3. 1.3 Resonance Structures
    4. 1.4 Resonance structures in Organic Chemistry
    5. 1.5 Valence-Shell Electron-Pair Repulsion Theory (VSEPR)
    6. 1.6 Valence Bond Theory and Hybridization
    7. Answers to Practice Questions Chapter 1
  8. Chapter 2 Fundamental of Organic Structures
    1. 2.1 Structures of Alkenes
    2. 2.2 Nomenclature of Alkanes
    3. 2.3 Functional Groups
    4. 2.4 IUPAC Naming of Organic Compounds with Functional Groups
    5. 2.5 Degree of Unsaturation/Index of Hydrogen Deficiency
    6. 2.6 Intermolecular Force and Physical Properties of Organic Compounds
    7. Answers to Practice Questions Chapter 2
  9. Chapter 3 Acids and Bases: Organic Reaction Mechanism Introduction
    1. 3.1 Review of Acids and Bases and Ka
    2. 3.2 Organic Acids and Bases and Organic Reaction Mechanism
    3. 3.3 pKa of Organic Acids and Application of pKa to Predict Acid-Base Reaction Outcome
    4. 3.4 Structural Effects on Acidity and Basicity
    5. 3.5 Lewis Acids and Lewis Bases
    6. Answers to Practice Questions Chapter 3
  10. Chapter 4 Conformations of Alkanes and Cycloalkanes
    1. 4.1 Conformation Analysis of Alkanes
    2. 4.2 Cycloalkanes and Their Relative Stabilities
    3. 4.3 Conformation Analysis of Cyclohexane
    4. 4.4 Substituted Cyclohexanes
    5. Answers to Practice Questions Chapter 4
  11. Chapter 5 Stereochemistry
    1. 5.1 Summary of Isomers
    2. 5.2 Geometric Isomers and E/Z Naming System
    3. 5.3 Chirality and R/S Naming System
    4. 5.4 Optical Activity
    5. 5.5 Fisher Projection
    6. 5.6 Compounds with More Than One Chirality Centers
    7. Answers to Practice Questions Chapter 5
  12. Chapter 6 Structural Identification of Organic Compounds: IR and NMR Spectroscopy
    1. 6.1 Electromagnetic Radiation and Molecular Spectroscopy
    2. 6.2 Infrared (IR) Spectroscopy Theory
    3. 6.3 IR Spectrum and Characteristic Absorption Bands
    4. 6.4 IR Spectrum Interpretation Practice
    5. 6.5 NMR Theory and Experiment
    6. 6.6 ¹H NMR Spectra and Interpretation (Part I)
    7. 6.7 ¹H NMR Spectra and Interpretation (Part II)
    8. 6.8 ¹³C NMR Spectroscopy
    9. 6.9 Structure Determination Practice
    10. Answers to Practice Questions Chapter 6
  13. Chapter 7 Nucleophilic Substitution Reactions
    1. 7.1 Nucleophilic Substitution Reaction Overview
    2. 7.2 SN2 Reaction Mechanism, Energy Diagram and Stereochemistry
    3. 7.3 Other Factors that Affect SN2 Reactions
    4. 7.4 SN1 Reaction Mechanism, Energy Diagram and Stereochemistry
    5. 7.5 SN1 vs SN2
    6. 7.6 Extra Topics on Nucleophilic Substitution Reaction
    7. Answers to Practice Questions Chapter 7
  14. Chapter 8 Elimination Reactions
    1. 8.1 E2 Reaction
    2. 8.2 E1 Reaction
    3. 8.3 E1/E2 Summary
    4. 8.4 Comparison and Competition Between SN1, SN2, E1 and E2
    5. Answers to Practice Questions Chapter 8
  15. Chapter 9 Free Radical Substitution Reaction of Alkanes
    1. 9.1 Homolytic and Heterolytic Cleavage
    2. 9.2 Halogenation Reaction of Alkanes
    3. 9.3 Stability of Alkyl Radicals
    4. 9.4 Chlorination vs Bromination
    5. 9.5 Stereochemistry for Halogenation of Alkanes
    6. 9.6 Synthesis of Target Molecules: Introduction of Retrosynthetic Analysis
    7. Answers to Practice Questions Chapter 9
  16. Chapter 10 Alkenes and Alkynes
    1. 10.1 Synthesis of Alkenes
    2. 10.2 Reactions of Alkenes: Addition of Hydrogen Halide to Alkenes
    3. 10.3 Reactions of Alkenes: Addition of Water (or Alcohol) to Alkenes
    4. 10.4 Reactions of Alkenes: Addition of Bromine and Chlorine to Alkenes
    5. 10.5 Reaction of Alkenes: Hydrogenation
    6. 10.6 Two Other Hydration Reactions of Alkenes
    7. 10.7 Oxidation Reactions of Alkenes
    8. 10.8 Alkynes
    9. Answers to Practice Questions Chapter 10
  17. About the Author

6.8 ¹³C NMR Spectroscopy

For carbon element, the most abundant isotope 12C (with ~99% natural abundance) does not have a nuclear magnetic moment, and thus is NMR-inactive. The C NMR is therefore based on the 13C isotope, that accounts for about 1% of carbon atoms in nature and has a magnetic dipole moment just like a proton. The theories we have learned about 1H NMR spectroscopy also applies to 13C NMR, however with several important differences about the spectrum.

The magnetic moment of a 13C nucleus is much weaker than that of a proton, meaning that 13C NMR signals are inherently much weaker than proton signals. This, combined with the low natural abundance of 13C, means that it is much more difficult to observe carbon signals. Usually, sample with high concentration and large number of scans (thousands or more) are required in order to bring the signal-to-noise ratio down to acceptable levels for 13C NMR spectra.

Chemical Equivalent

For carbons that are chemical equivalent, they only show one signal in 13C NMR as like protons for 1HNMR. So it is very important to be able to identify equivalent carbons in the structure, in order to interpret 13C NMR spectrum correctly. Taking toluene as an example, there are five sets of different carbon atoms (shown in different colors), so there are five signals in the 13C NMR spectrum of toluene.

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Chemical Shift

13C nuclei has different value of g (the magnetogyric ratio) comparing to 1H nuclei, so the resonance frequencies of 13C nuclei is different to those of protons in the same applied field (referring to formula. 6.4, in section 6.5). In an instrument with a 7.05 Tesla magnet, protons resonate at about 300 MHz, while carbons resonate at about 75 MHz. This allows us to look at 13C signals using a completely separate ‘window’ of radio frequencies. Just like in 1H NMR, tetramethylsilane (TMS) is also used as the standard compound in 13C NMR experiments to define the 0 ppm, however it is the signal from the four equivalent carbon atoms in TMS that serves as the standard. Chemical shifts for 13C nuclei in organic molecules are spread out over a much wider range of about 220 ppm (see Table 6.3).

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Table 6.3 Approximate 13C NMR chemical shifts of some common groups

The chemical shift of a 13C nucleus is influenced by essentially the same factors that influence the chemical shift a proton: the deshielding effect of electronegative atoms and anisotropy effects tend to shift signals downfield (higher resonance frequency, with higher chemical shifts). In addition, sp2 hybridization results in a large downfield shift.  The 13C NMR signals for carbonyl carbons are generally the furthest downfield (170-220 ppm), due to both sp2 hybridization and to the double bond to oxygen.

Integration and Coupling in 13C NMR

Unlike 1H NMR, the area under a 13C NMR signal cannot easily be used to determine the number of carbons to which it corresponds. The signals for some types of carbons are inherently weaker than for other types, for example peaks corresponding to carbonyl carbons are much smaller than those for methyl or methylene (CH2) peaks. For this reason, signal integration is generally not useful in 13C NMR spectroscopy.

Because of the low natural abundance of 13C nuclei, the spin-spin coupling between two nonequivalent 13C atoms is negligible. 13C nuclei are coupled to nearby protons, however, which results in complicated spectra. For clarity, chemists generally use a technique called broadband decoupling, which essentially ‘turns off’  C-H coupling, resulting in a spectrum in which all carbon signals are singlets. Below is the proton-decoupled 13C NMR spectrum of ethyl acetate in CDCl3 (Fig. 6.8a), showing the expected four signals, one for each of the carbons.

C2 at 171ppm, CDCL3 at ~77ppm, C3 at 60ppm, C1 at 21ppm, & C4 at 14ppm
Figure 6.8a The 13C NMR spectrum of ethyl acetate

For our class purpose, 13C NMR spectra are usually used as supporting information to confirm the structure of a compound.

Exercises 6.2

Below are 13C NMR spectra for methylbenzene (common name toluene) and methyl methacrylate.  Refer to Table 6.3 to match the spectra to the correct structure.
toluene & methyl methacrylate
C at 168ppm, C at 137ppm, CH2 at 125ppm, CDCL3 at 78ppm, CH3 at 52ppm, & CH3 at 18ppm C at 138ppm, CH at 129ppm, CH at 128ppm, CH at 126ppm, CDCl3 at 77ppm, & CH3 at 23ppm
Answers to Practice Questions Chapter 6

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6.9 Structure Determination Practice
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